연구분야

• 식물 전사체 및 대사체 분석, 유용 2차 대사산물 생합성 경로 탐색, 기능성 물질 축적 요인 탐색, 생물정보학을 통한 유전체 분석, 비교유전체 및 진화유전체

학력

• 서울대학교, 식물생산과학부 학사
• 서울대학교, 작물생명과학과 석사
• Purdue University, Molecular evolutionary genetics 박사
  [학위논문제목] Genome structure variation in glycine species (지도교수: Prof. Scott A. Jackson)

경력

• 2011.08. - 2013.07. 조지아주립대학교 research assistant & postdoctoral fellow
• 2013.08. - 2016.09. 네바다 주립대학교 postdoctoral research scholar
• 2016.11. - 2019.02. 서울대학교 식물생산과학부 선임연구원
• 2020.03. - 현재 국립강릉원주대학교 식물생명과학과 조교수  

주요강의교과목

• 식물유전체학, 생물정보학, 식량작물학, 식물유전학, 식물과화학, 식물생화학

학술 활동 - (1)논문

• 1. J Ha, S Shim, T Lee, YJ Kang, WJ Hwang, H Jeong, K Laosatit, J Lee, SK Kim, D Satywan, P Lestari, MY Yoon, MY Kim, A Chitikineni, P Tanya, P Somta, P Srinives, RK Varshney, SH Lee. 2019. Genome sequence of Jatropha curcas L., a non-edible biodiesel plant, provides a resource to improve seed-related traits. Plant Biotechnology Journal. 17:517-530
• 2. J Ha, YG Kang, T Lee, M Kim, MY Yoon, E Lee, X Yang, D Kim, YJ Kim, TR Lee, MY Kim, SH Lee. 2019. Comprehensive RNA sequencing and co-e-x-p-r-e-s-s-i-o-n network analysis to complete the biosynthetic pathway of coumestrol, a phytoestrogen. Scientific Reports. 9:1934
• 3. J Ha, HH Jeon, DU Woo, Y Lee, H Park, J Lee, YJ Kang. 2019. Soybean-VCF2Genomes: a database to identify the closest accession in soybean germplasm collection. BMC Bioinformatics. 20:384
• 4. X Yang, MY Kim, J Ha, SH Lee. 2019. Overe-x-p-r-e-s-s-i-o-n of the soybean NAC gene GmNAC109 increases lateral root formation and abiotic stress tolerance in transgenic Arabidopsis plants. Frontiers in Plant Science. 10:1036
• 5. MY Yoon, MY Kim, J Ha, T Lee, KD Kim, SH Lee. 2019. QTL analysis of resistance to high-intensity UV-B irradiation in soybean (Glycine max [L.] Merr.). International Journal of Molecular Sciences. 20: 3287
• 6. S Shim, J Ha, MY Kim, MS Choi, ST Kang, SC Jeong, JK Moon, SH Lee. 2019. GmBRC1 is a candidate gene for branching in soybean (Glycine mx (L.) Merrill). International Journal of Molecular Sciences. 20: 135.
• 7. J Ha, M Kim, MY Kim, T Lee, MY Yoon, J Lee, YH Lee, YG Kang, JS Park, JH Lee, SH Lee. 2018. Transcriptomic variation in proanthocyanidin biosynthesis pathway genes in soybean (Glycine spp.). Journal of the Science of Food and Agriculture. 98(6): 2138-2146.
• 8. T Lee, MY Kim, J Ha, SH Lee. 2018. Detection of large sequence insertions by a hybrid approach that combine de novo assembly and resequencing of medium-coverage genome sequences. Genome. 61:745-754
• 9. X Yang, R Hu, H Yin, J Jenikins, S Shu, H Tang, D Liu, DA Weighill, WC Yim, J Ha, K Heyduk, DM Goodstein, HB Guo, RC Moseley, E Fitzek, S Jawdy, Z Zhang, M Xie, J Hartwell, J Grimwood, PE Abraham, R Mewalal, JD Beltran, SF Boxall, LV Dever, KJ Palla, R Albion, T Garcia, JA Mayer, SD Lim, CM Wai, P Peluso, RV Buren, HC De Paoli, AM Borland, H Guo, JG Chen, W Muchero, Y Yin, DA Jacobson, TJ Tschaplinski, RL Hettich, R Ming, K Winter, JH Leebens-Mack, JAC Smith, JC Cushman, J Schmutz, GA Tuskan. 2017. The Kalanchoe genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism. Nature Communication. 8(1): 1899.
• 10. J Ha, T Lee, MY Kim, BK Oliya, JG Gwag, YH Lee, SH Lee. 2017. Comprehensive transcriptome analysis of Lactuca indica, a traditional medicinal wild plant. Molecular Breeding. 37:112.
• 11. WJ Hwang, J Ha, T Lee, H Jeong, MY Kim, S Kim, YH Lee, JW Jung, SH Lee. 2017. A candidate flowering gene in mungbean is homogous to a soybean Phytochrome A gene. Euphytica. 213:79.
• 12. S Shim, MY Kim, J Ha, YH Lee, SH Lee. 2017. Identification of QTLs for branching in soybean (Glycine max (L.) Merrill). Euphytica. 213:225.
• 13. MY Yoon, MY Kim, J Lee, T Lee, KH Kim, J Ha, YH Kim, SH Lee. 2017. Transcriptomic profiling of soybean in response to UV-B and Xanthomonas axonopodis treatment reveals shared gene components in stress defense pathways. Genes & Genomics. Volume 39, Issue 2, pp 225-236.
• 14. MY Yoon, MY Kim, S Shim, KD Kim, J Ha, JH Shin, S Kang, SH Lee. 2016. Transcriptomic profiling of soybean in response to high-intensity UV-B irradiation reveals stress defense signaling. Frontiers in Plant Science. 7:1917.
• 15. K Yang, SK Thamilarasan, JM Ko, J Ha, IY Baek, YH Lee, JK Kang, MY Chung, IS Nou. 2015. Sequence-based DNA marker for simultaneous genotyping of all three β-conglycinin subunit genes in soybean. Journal of Applied Botany and Food Quality. 88:288-294
• 16. X Yang, JC Cushman, AM Borland, EJ Edwards, SD Wullschleger, GA Tuskan, NA Owen, H Griffiths, JAC Smith, HCD Paoli, DJ Weston, R Cottingham, J Hartwell, SC Davis, K Silvera, R Ming, K Schlauch, P Abraham, JR Stewart, H Guo, R Albion, J Ha, SD Lim, BWM Wone, WC Yim, T Garcia, JA Mayer, J Petereit, SS Nair, E Casey, RD Hettich, J Ceusters, P Ranjan, KJ Palla, H Yin, C Reyes-García, JL Andrade, L Freschi, LV Dever, SF Boxall, J Waller, J Davies, P Bupphada, N Kadu, K Winter, RF Sage, CN Aguilar, J Schmutz, J Jenkins, JAM Holtum. 2015. A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world. New Phytologist. Volumn 207, pp 491-504.
• 17. J Ha, B Abernathy, W Nelson, D Grant, X Wu, HT Nguyen, G Stacey, Y Yu, RA Wing, RC Shoemaker, SA Jackson. 2012. Integration of the draft sequence and physical map as a framework for genomic research in soybean (Glycine max (L.) Merr.) and wild soybean (Glycine soja Sieb. And Zucc.). G3: Genes| Genomes| Genetics. Volumn 2, pp 321-329.
• 18. J Ha, P Lestari, SH Lee. 2012. Nucleotide diversity of the upstream region of the putative MADS-box gene controlling soybean maturity. Genes & Genomics. Volumn 35, pp 159-166
• 19. I Lim and J Ha. 2021. Biosynthetic Pathway of Proanthocyanidins in Major Cash Crops. Plants 10, no. 9:1792.
• 20. J Ha, D Satyawan, H Jeong, E Lee, KH Cho, MY Kim, and SH Lee. 2021. A near‐complete genome sequence of mungbean (Vigna radiata L.) provides key insights into the modern breeding program. The Plant Genome e20121.
• 21. E Lee, X Yang, J Ha, MY Kim, KY Park, and SH Lee. 2021. Identification of a Locus Controlling Compound Raceme Inflorescence in Mungbean [Vigna radiata (L.) R. Wilczek]. Frontiers in genetics 12:306.
• 22. K Zou, KS Kim, K Kim, D Kang, YH Park, H Sun, BK Ha, J Ha, and TH Jun. 2021. Genetic Diversity and Genome-Wide Association Study of Seed Aspect Ratio Using a High-Density SNP Array in Peanut (Arachis hypogaea L.). Genes 12, no. 1:2.
• 23. JM Kim, J Ha, KH Kim, T Lee, J Heo, J Jung, J Lee, and S Kang. 2021. Identification of a novel trait associated with phytotoxicity of an insecticide etofenprox in soybean. Journal of pesticide science D20-073.
• 24. J Ha, S Shim, T Lee, E Lee, X Yang, H Jeong, MY Kim, and SH Lee. 2020. Transcriptomic and biochemical analyses of the accumulation of sucrose in mungbean (Vigna radiata (L.) Wilczek) leaves after pod removal. Theoretical and Applied Genetics 133:2355-2362.
• 25. J Ha, H Kwon, KH Cho, MY Yoon, MY Kim, and SH Lee. 2020. Identification of epigenetic variation associated with synchronous pod maturity in mungbean (Vigna radiata L.). Scientific reports 10, no. 1:1-8.
• 26. JH Jung, J. Ha, M. Y. Kim, J-E. Kim, H. Son, and S-H. Lee. 2019. First Report of Alternaria alternata Causing Leaf Spot on Mungbean (Vigna radiata) in the Republic of Korea. Plant Disease 103, no. 5:1028-1028.

학술 활동 - (2)저서

• 1. J Ha, SH Lee. Mungbean (Vigna radiata). In “Advances in Plant Breeding Strategies” Volume 5 Cereals and Legumes, edited by JM Al-Khayri, SM Jain and DV Johnson, Springer, 2019.
• 2. J Ha, SH Lee. Updates on Legume Genome Sequencing. In “Legume Genomics” Volume 2107 Methods and Protocols, edited by Mukesh Jain and Rohini Garg, Springer, 2020.
• 3. YJ Kang, J Ha. Mungbean Genome and Synteny with Other Genomes. In “The Mungbean Genome” edited by R M Nair, R Schafleitner and SH Lee, Springer, 2020